AI Diagram Tool

Phylogenetic Tree Maker

Name the organisms — or paste a Newick string — and the AI works out the branching order, scales the branches and draws a clean tree with support values and a scale bar. No alignment files, no desktop software.

Phylogenetic tree styles

Five ways to draw an evolutionary tree, each shown with a real render — click a card to apply the style, or zoom for the full image.

Phylogram
Time-calibrated tree
Annotated clades
Illustrated tips
Whiteboard sketch

What is a phylogenetic tree?

A phylogenetic tree is a branching diagram of how a set of organisms — species, populations or genes — descend from common ancestors. Each tip is a taxon, each internal node is the most recent common ancestor of everything beyond it, and the branches between them are lineages. What separates it from a plain cladogram is that here branch length is a quantity: on a phylogram it is proportional to the amount of evolutionary change along that lineage, on a chronogram it is elapsed time, and the scale bar tells you which one you are reading.

Most published trees carry two more things. A support value at each node — a bootstrap percentage or a Bayesian posterior probability — says how strongly the data back that particular grouping, and an outgroup roots the tree so the direction of descent is defined. This phylogenetic tree maker produces the figure: describe the group in plain words, paste a Newick string, or give your own divergence times, and the AI resolves the topology and draws it ready for a lecture slide, a thesis or a paper.

How it works

1

Describe the group

Name the species, paste a Newick string with branch lengths, give your divergence times, or just name the group — "the great apes". The AI works out the branching order and how far each lineage runs, using the accepted phylogeny when you have not specified one.

2

Pick a tree style

A publication phylogram with branches to scale and support values at the nodes, a time-calibrated tree over an axis in millions of years, shaded clade blocks for a review figure, illustrated tips, or a whiteboard sketch.

3

Refine in the workspace

The tree opens in your workspace where you can edit regions, adjust labels, upscale and export in high resolution for slides, posters, theses or papers.

The parts of a phylogenetic tree

A published tree carries a great deal more than its branching order, and most of what it adds is easy to skim past. These are the parts that hold that extra information — worth checking whenever you read one, and the ones the generator can label for you:

Branch length

The horizontal extent of a lineage — the quantity a cladogram leaves out.

Scale bar

What one unit of branch length means, in substitutions per site.

Support value

Bootstrap or posterior at a node — how well the data back that split.

Node age

On a time-calibrated tree, where a node falls on the axis in millions of years.

Outgroup

A taxon outside the group of interest; without one the tree has no root and states no direction.

Tip alignment

Tips level with one another, or each stopping at its own depth — the first clue to which kind of tree you are holding.

Sister groups

The two lineages leaving one node; each is the other's closest relative on the tree.

Topology

The branching skeleton — root, nodes, tips and clades — which this shares with every cladogram.

Only the horizontal axis carries information. The vertical order of the tips is a drawing convention: the branches at any node can be rotated freely, and one tree can be drawn rectangular, slanted or circular without changing a single relationship it states.

Root, nodes, tips and clades mean the same thing on every tree, cladograms included, so this page does not redefine them. That vocabulary is set out in full here: Cladogram Maker

How to read a phylogenetic tree without misreading it

Almost every mistake with these diagrams comes from reading something into the drawing that the tree does not say. Three worth naming:

Distance is measured along the branches, not down the page

Two tips printed next to each other can be distant relatives. Relatedness is where the lineages meet — the taxa sharing the most recent common ancestor are the closest — and on a phylogram, evolutionary distance is the total branch length between two tips, never the gap between their rows.

The longest branch is not the most advanced

Every living tip has had exactly the same amount of time since the root. A long branch means that lineage accumulated more change, usually because it evolves quickly or split off early — not that it is more complex, more successful or more modern.

A node without support is not a settled relationship

A bootstrap of 55 says the data barely prefer that grouping over the alternatives. A tree printed with low support values, or none at all, is stating a hypothesis — the parts you can lean on are the well-supported ones.

Who is it for?

Papers, theses & reviews

Clean phylograms with exact taxon names, support values and a scale bar for a background section, a review or a systematics panel — without preparing a data file or opening tree-drawing software.

Lectures & science communication

Time-calibrated trees and illustrated tips are what a slide or an explainer needs — the kind of figure phylogenetics software will not draw and an illustrator has to be commissioned for.

Teachers & students

Trees for evolution units, revision notes and lab reports: name the group and get a diagram that places roots, nodes, clades and the outgroup correctly, or a whiteboard version for the lesson itself.

Frequently asked questions

How does the AI phylogenetic tree generator work?

You describe the group in plain language. The AI first works out the topology — which taxa form each clade, how far each lineage runs, and what value sits at each node — then draws the tree with your exact taxon names at the tips. Give it just a group name and it uses the currently accepted phylogeny with published branch lengths; give it a tree of your own and it follows that instead.

Can it read Newick format?

Yes. Paste a Newick string and the topology is drawn exactly as written, with its branch lengths and any support values carried through unchanged. If you do not have a file, writing the grouping out in words works just as well — "human and chimp together, then gorilla, then orangutan".

Can I make a time-calibrated tree with divergence times?

Yes — pick the Time-calibrated tree style. Give the ages you want at each node, or simply name the group and the AI uses published divergence estimates. The figure gets a horizontal axis in millions of years with the node ages marked along it, and every tip reaching the present.

Is this a phylogenetics package? Can I load an alignment or compute bootstrap values?

No — this makes tree *figures* for papers, teaching, slides and articles, not phylogenetic inference. If you need to estimate a tree from sequence data, use MEGA, RAxML, IQ-TREE, MrBayes or iTOL. Support values you supply are drawn exactly as given; ones you do not supply are plausible published figures, not a calculation on your data.

What is the difference between a phylogenetic tree and a cladogram?

A cladogram shows branching order alone — its branch lengths are arbitrary. A phylogram scales branch length to the amount of evolutionary change and a chronogram scales it to time. All three are phylogenetic trees, so pick by what you need to say: if only the relationships matter, the cladogram maker draws the simpler figure.

Is the phylogenetic tree maker free? Can I use the trees commercially?

You can generate trees on the free plan (with a watermark on exports). Paid plans remove the watermark and unlock every model and high-resolution export, and you can use your figures in courses, publications and commercial material.

Draw your first phylogenetic tree

From a list of organisms to a publication-ready tree in about a minute.

Start drawing